Mapa webu
Zobrazuje se pouze ta část webu, která je v českém jazyce. Pokud má web i anglickou větev, přepněte na anglický jazyk v menu.
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src=\"\/images\/0!0\/uzel\/0143385\/0001~~K8hJzEvNjg_1dPaILzPRLassSq2KTy6OT80DAA.png\" class=\"img_float_right img_fancy_no\" alt=\"pl\u00e1nek UICH v4-v\u00fd\u0159ez cs+en\" width=\"225\" height=\"175\"><\/a><\/p>\r\n<p>prof. <strong>Daniel Svozil<\/strong>, Ph.D.<br><em>vedouc\u00ed \u00fastavu<\/em><\/p>\r\n<p>\u2709 daniel.svozil at vscht.cz <br>\u260f 220 442 244 <br>\ud83c\udff1 <a 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01:52:20.445304","platne_do":null,"iduzel":"129860","obsah":"a:6:{s:5:\"nazev\";s:0:\"\";s:12:\"barva_pozadi\";s:7:\"cervena\";s:8:\"uslideru\";s:5:\"false\";s:10:\"podstranky\";s:4:\"true\";s:6:\"sticky\";s:0:\"\";s:4:\"text\";s:0:\"\";}","class":"infobox","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0},"129861":{"idvazba":"159537","nad_uzel":"129859","pod_uzel":"129861","url":"\/o-ustavu\/profil","sablona":"49","nazev":"Profil a historie \u00fastavu","_url_prefix":"{\/\/uich.vscht.cz\/o-ustavu\/profil}","poradi":"1","skupina_www":"everyone","platne_od":"05.08.2026 13:18:00","platne_do":null,"iduzel":"129861","obsah":"a:14:{s:5:\"nazev\";s:30:\"Historie a zam\u011b\u0159en\u00ed \u00fastavu\";s:9:\"seo_title\";s:25:\"Profil a historie \u00fastavu\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:0:\"\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:1224:\"<p><span style=\"font-weight: 400;\">V roce 2002 byla na V\u0160CHT Praha zalo\u017eena iniciativou Dr. Miloslava Ni\u010de <em>Laborato\u0159 informatiky a chemie<\/em>. 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S jeho p\u0159\u00edchodem se zam\u011b\u0159en\u00ed laborato\u0159e zm\u011bnilo a nyn\u00ed se pracovi\u0161t\u011b zab\u00fdv\u00e1 v\u00fdzkumem v oborech bioinformatika, cheminformatika, po\u010d\u00edta\u010dov\u00fd n\u00e1vrh l\u00e9\u010div a molekulov\u00e9 modelov\u00e1n\u00ed. <\/span><span style=\"font-weight: 400;\">To se odrazilo i v akreditaci Bc. a Mgr. programu <a href=\"\/studium\" rel=\"follow noopener\">\u201eBioinformatika\u201c<\/a>, kter\u00fd je na V\u0160CHT vyu\u010dov\u00e1n od akademick\u00e9ho roku 2014\/2015.<\/span><\/p>\r\n<p><span style=\"font-weight: 400;\">V listopadu 2017 byla <em>Laborato\u0159<\/em> transformov\u00e1na na <em>\u00dastav informatiky a chemie<\/em>. V roce 2019\/2020 pak byla zah\u00e1jena v\u00fduka v doktorsk\u00e9m studijn\u00edm programu \u201eBioinformatika\u201c.<\/span><\/p>\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","poduzly_count":0,"poduzly_count_aut":0},"129862":{"idvazba":"159538","nad_uzel":"129859","pod_uzel":"129862","url":"\/o-ustavu\/lide","sablona":"49","nazev":"Lid\u00e9 na \u00fastavu","_url_prefix":"{\/\/uich.vscht.cz\/o-ustavu\/lide}","poradi":"2","skupina_www":"everyone","platne_od":"14.08.2026 12:45:00","platne_do":null,"iduzel":"129862","obsah":"a:14:{s:5:\"nazev\";s:16:\"Lid\u00e9 na \u00fastavu\";s:9:\"seo_title\";s:16:\"Lid\u00e9 na \u00fastavu\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:0:\"\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:4483:\"<h2>Zam\u011bstnanci<\/h2>\r\n<ul>\r\n<li>prof. Mgr. <strong>Daniel Svozil<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/470\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Ivan \u010cmelo<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/888\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>M.Sc. <strong>Wim Frans Dehaen<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/1476\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Ji\u0159\u00ed Jir\u00e1t<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/532\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li><strong>Kyrylo Klimenko<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4633\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Mgr. <strong>Michal Kol\u00e1\u0159<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/1841\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>doc. Ing. <strong>Filip Lanka\u0161<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/1385\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Mgr. <strong>Jan Pa\u010des<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/1839\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Martin \u0160\u00edcho<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/1106\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Milan Vor\u0161il\u00e1k<\/strong>, Ph.D. \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/934\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Ji\u0159\u00ed Znamen\u00e1\u010dek<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/548\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<\/ul>\r\n<p><\/p>\r\n<h2>Ph.D. studenti<\/h2>\r\n<ul>\r\n<li>M.Sc. B.Sc. <strong>Akmese Safa Mert<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4477\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Bushuiev Roman<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/3830\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>M.Sc. <strong>Ceklarz Joanna<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4223\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Engst Martin<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4183\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Fil Valeriia<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/3623\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>F\u00fcl\u00f6p Jozef<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4037\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Hanzl\u00edk Adam<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4666\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li><strong>Hor\u0148\u00e1k Milan<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4649\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Mgr. <strong>Jandov\u00e1 M\u00f4nica<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4648\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Mgr. <strong>Kerti Luk\u00e1\u0161<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4561\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Maurencov\u00e1 Dominika<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/3833\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Melichar Vojt\u011bch<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4184\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Mgr. <strong>N\u00f3gell Adam<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/4194\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Radocha Martin<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/3693\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<li>Ing. <strong>Ve\u010derkov\u00e1 Kate\u0159ina<\/strong> \u2013 <a href=\"https:\/\/telefony.vscht.cz\/cs\/Person\/3865\" target=\"_blank\" rel=\"noopener\">profil v telefonn\u00edm seznamu<\/a><\/li>\r\n<\/ul>\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","poduzly_count":0,"poduzly_count_aut":0}}},"129863":{"idvazba":"159539","nad_uzel":"129850","pod_uzel":"129863","url":"\/studium","sablona":"49","nazev":"Studium","_url_prefix":"{\/\/uich.vscht.cz\/studium}","poradi":"2","skupina_www":"everyone","platne_od":"16.03.2026 01:52:20.468125","platne_do":null,"iduzel":"129863","obsah":"a:14:{s:5:\"nazev\";s:18:\"Studium na \u00fastavu\";s:9:\"seo_title\";s:7:\"Studium\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:0:\"\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:0:\"\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","pod_uzly":["129864","143407","143394","129865","129866","129867"],"poduzly_count":6,"poduzly_count_aut":5,"poduzly":{"poduzly_count_aut_sum":0,"129864":{"idvazba":"159540","nad_uzel":"129863","pod_uzel":"129864","url":"","sablona":"4","nazev":"[box] v\u00fdpis pod\u0159\u00edzen\u00fdch str\u00e1nek","_url_prefix":null,"poradi":"0","skupina_www":"everyone","platne_od":"16.03.2026 01:52:20.47443","platne_do":null,"iduzel":"129864","obsah":"a:6:{s:5:\"nazev\";s:0:\"\";s:12:\"barva_pozadi\";s:7:\"cervena\";s:8:\"uslideru\";s:5:\"false\";s:10:\"podstranky\";s:4:\"true\";s:6:\"sticky\";s:0:\"\";s:4:\"text\";s:0:\"\";}","class":"infobox","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0},"143407":{"idvazba":"176677","nad_uzel":"129863","pod_uzel":"143407","url":"\/studium\/chci-studovat","sablona":"49","nazev":"Chci studovat bioinformatiku","_url_prefix":"{\/\/uich.vscht.cz\/studium\/chci-studovat}","poradi":"1","skupina_www":"everyone","platne_od":"07.08.2026 11:30:00","platne_do":null,"iduzel":"143407","obsah":"a:14:{s:5:\"nazev\";s:14:\"Bioinformatika\";s:9:\"seo_title\";s:28:\"Chci studovat bioinformatiku\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:181:\"<ul>\r\n<li><a href=\"\/studium\/bakalarske\">bakal\u00e1\u0159sk\u00e1<\/a><\/li>\r\n<li><a href=\"\/studium\/magisterske\">magistersk\u00e1<\/a><\/li>\r\n<li><a href=\"\/studium\/doktorske\">doktorsk\u00e1<\/a><\/li>\r\n<\/ul>\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:3921:\"<h2>Co je bioinformatika?<\/h2>\r\n<p>Bioinformatika je sklouben\u00edm molekul\u00e1rn\u00ed a bun\u011b\u010dn\u00e9 biologie, biochemie, statistiky a po\u010d\u00edta\u010dov\u00e9 v\u011bdy. Zab\u00fdv\u00e1 se nejen v\u00fdvojem n\u00e1stroj\u016f pro p\u0159\u00edstup, pou\u017e\u00edv\u00e1n\u00ed a spr\u00e1vu biologick\u00fdch datab\u00e1z\u00ed, ale p\u0159edev\u0161\u00edm anal\u00fdzou, interpretac\u00ed a vyhled\u00e1v\u00e1n\u00edm vztah\u016f v molekul\u00e1rn\u011b-biologick\u00fdch datech. Zkr\u00e1tka, <em>biologie v po\u010d\u00edta\u010di<\/em>.<\/p>\r\n<div style=\"position: relative; padding-bottom: 55%; padding-top: 30px; height: 0; overflow: hidden;\"><iframe style=\"position: absolute; top: 0; left: 0; width: 100%; height: 100%;\" src=\"https:\/\/www.youtube.com\/embed\/W-Ov2cUaYQY\" frameborder=\"0\" allowfullscreen=\"allowfullscreen\"><\/iframe><\/div>\r\n<h2>Koncepce studia<\/h2>\r\n<p>Pro zaji\u0161t\u011bn\u00ed studia se spojily dv\u011b kvalitn\u00ed pra\u017esk\u00e9 univerzity <strong><a href=\"http:\/\/www.vscht.cz\/\">V\u0160CHT<\/a><\/strong> a <strong><a href=\"http:\/\/www.cvut.cz\/\">\u010cVUT<\/a><\/strong> se dv\u011bma \u00fastavy <a href=\"https:\/\/www.cas.cz\"><strong>Akademie v\u011bd<\/strong><\/a>. Zat\u00edmco V\u0160CHT poskytuje vzd\u011bl\u00e1n\u00ed z oblasti p\u0159\u00edrodn\u00edch v\u011bd, <strong><a href=\"http:\/\/www.fit.cvut.cz\/\">Fakulta informa\u010dn\u00edch technologi\u00ed \u010cVUT<\/a><\/strong> zaji\u0161\u0165uje v\u00fduku informatiky orientovan\u00e9 sm\u011brem jak praktick\u00fdm, tak teoretick\u00fdm. Na zainteresovan\u00fdch \u00fastavech Akademie v\u011bd pak p\u016fsob\u00ed dv\u011b nejv\u011bt\u0161\u00ed pra\u017esk\u00e9 bioinformatick\u00e9 skupiny, jejich\u017e v\u00fdzkumn\u00e9 z\u00e1jmy a odborn\u00e9 znalosti pokr\u00fdvaj\u00ed celou \u0161\u00ed\u0159i bioinformatiky.<\/p>\r\n<table style=\"border-collapse: collapse; width: 100%;\"><colgroup><col style=\"width: 4.83384%;\"><col style=\"width: 4.83384%;\"><col style=\"width: 4.83384%;\"><col style=\"width: 4.83384%;\"><\/colgroup>\r\n<tbody>\r\n<tr>\r\n<td><a href=\"https:\/\/fcht.vscht.cz\/\"><img src=\"\/images\/0!0\/uzel\/0143407\/0002~~y8lPz48PC3b2CNF1AxLxGQA.png\" class=\"img_fancy_no\" alt=\"logo V\u0160CHT FCHT\" width=\"170\" height=\"33\"><\/a><\/td>\r\n<td><a href=\"https:\/\/www.fit.cvut.cz\/\"><img src=\"\/images\/0!0\/uzel\/0143407\/0003~~y8lPz493DgsN0XXzDInPAAA.png\" class=\"img_fancy_no\" alt=\"logo \u010cVUT FIT\" width=\"95\" height=\"33\"><\/a><\/td>\r\n<td><a href=\"https:\/\/www.img.cas.cz\/\"><img src=\"\/images\/0!0\/uzel\/0143407\/0004~~y8lPz493dgzW9fR1j88AAA.png\" class=\"img_fancy_no\" alt=\"logo CAS IMG\" width=\"170\" height=\"48\"><\/a><\/td>\r\n<td><a href=\"https:\/\/www.uochb.cz\/\"><img src=\"\/images\/0!0\/uzel\/0143407\/0001~~y8lPz48P9Xf2cIrPAAA.png\" class=\"img_fancy_no\" alt=\"logo UOCHB\" width=\"94\" height=\"33\"><\/a><\/td>\r\n<\/tr>\r\n<\/tbody>\r\n<\/table>\r\n<h2>Co se nau\u010d\u00ed\u0161?<\/h2>\r\n<p>Studijn\u00ed program <em>Bioinformatika a chemick\u00e1 informatika<\/em> si klade za c\u00edl vychovat v\u0161estrann\u00e9 odborn\u00edky na anal\u00fdzu, zpracov\u00e1n\u00ed a interpretaci dat z\u00edskan\u00fdch v <em>biologii<\/em>, <em>biochemii<\/em>, <em>biomedic\u00edn\u011b<\/em> a dal\u0161\u00edch souvisej\u00edc\u00edch oblastech. Absolvent studia z\u00edsk\u00e1 hlubok\u00e9 vzd\u011bl\u00e1n\u00ed v p\u0159\u00edrodn\u00edch v\u011bd\u00e1ch (<em>chemie<\/em>, <em>molekul\u00e1rn\u00ed biologie<\/em>, <em>matematika<\/em> a <em>statistika<\/em>). Informatika pro n\u011bj pak p\u0159edstavuje u\u017eite\u010dn\u00fd n\u00e1stroj, kter\u00fd mu bude pom\u00e1hat napl\u0148ovat hlavn\u00ed c\u00edl jeho pr\u00e1ce, j\u00edm\u017e je hled\u00e1n\u00ed z\u00e1konitost\u00ed a vztah\u016f v \u017eiv\u00fdch syst\u00e9mech.<\/p>\r\n<h2>...a co potom?<\/h2>\r\n<p>Absolventi studijn\u00edho programu <em>Bioinformatika a chemick\u00e1 informatika<\/em> z\u00edskaj\u00ed kvalitn\u00ed vzd\u011bl\u00e1n\u00ed z chemick\u00fdch a molekul\u00e1rn\u011b-biologick\u00fdch obor\u016f, budou m\u00edt znalosti z informatiky, p\u0159edev\u0161\u00edm z algoritmizace a programov\u00e1n\u00ed, opera\u010dn\u00edch syst\u00e9m\u016f, datab\u00e1zov\u00fdch syst\u00e9m\u016f a po\u010d\u00edta\u010dov\u00fdch s\u00edt\u00ed. Naleznou uplatn\u011bn\u00ed v \u00fastavech zam\u011b\u0159en\u00fdch na <em>biologick\u00fd<\/em>, <em>chemick\u00fd<\/em> a <em>biotechnologick\u00fd v\u00fdzkum<\/em>, v <em>zem\u011bd\u011blstv\u00ed<\/em> \u010di v <em>chemick\u00fdch<\/em>, <em>potravin\u00e1\u0159sk\u00fdch<\/em>, <em>farmaceutick\u00fdch<\/em> nebo <em>biotechnologick\u00fdch firm\u00e1ch<\/em> a ve <em>zdravotnick\u00fdch za\u0159\u00edzen\u00edch<\/em>.<\/p>\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","pod_uzly":["143408","143409","143410"],"poduzly_count":3,"poduzly_count_aut":0,"poduzly":{"poduzly_count_aut_sum":0,"143408":{"idvazba":"176674","nad_uzel":"143407","pod_uzel":"143408","url":"","sablona":"4","nazev":"Info","_url_prefix":null,"poradi":"0","skupina_www":"everyone","platne_od":"08.09.2026 15:07:00","platne_do":null,"iduzel":"143408","class":"infobox","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0},"143409":{"idvazba":"176675","nad_uzel":"143407","pod_uzel":"143409","url":"","sablona":"4","nazev":"Odkazy","_url_prefix":null,"poradi":"1","skupina_www":"everyone","platne_od":"07.08.2026 11:22:00","platne_do":null,"iduzel":"143409","class":"infobox","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0},"143410":{"idvazba":"176676","nad_uzel":"143407","pod_uzel":"143410","url":"","sablona":"4","nazev":"Kontakty","_url_prefix":null,"poradi":"2","skupina_www":"everyone","platne_od":"07.08.2026 12:32:00","platne_do":null,"iduzel":"143410","class":"infobox","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0}}},"143394":{"idvazba":"176680","nad_uzel":"129863","pod_uzel":"143394","url":"\/studium\/bioinformatika","sablona":"49","nazev":"Bioinformatika ve vide\u00edch","_url_prefix":"{\/\/uich.vscht.cz\/studium\/bioinformatika}","poradi":"2","skupina_www":"everyone","platne_od":"07.08.2026 11:21:00","platne_do":null,"iduzel":"143394","obsah":"a:14:{s:5:\"nazev\";s:26:\"Bioinformatika ve vide\u00edch\";s:9:\"seo_title\";s:26:\"Bioinformatika ve vide\u00edch\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:0:\"\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:16:\"0001~~S0oHAA.png\";s:5:\"obsah\";s:2181:\"<ul>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=W-Ov2cUaYQY\" target=\"_blank\" rel=\"noopener\"> Co je to bioinformatika <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=jEJp7B6u_dY\" target=\"_blank\" rel=\"noopener\"> \u00davod do lidsk\u00e9ho genomu <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=whV_CkKT7F0\" target=\"_blank\" rel=\"noopener\"> Centr\u00e1ln\u00ed dogma molekul\u00e1rn\u00ed biologie <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=AmOO4j0E408\" target=\"_blank\" rel=\"noopener\"> Co jsou nukleov\u00e9 kyseliny <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=_EYsykjsfiY\" target=\"_blank\" rel=\"noopener\"> Jak se manipuluje s DNA v laborato\u0159i \u2013 techniky genetick\u00e9ho in\u017een\u00fdrstv\u00ed <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=X9566yI2cBo\" target=\"_blank\" rel=\"noopener\"> Sekvenov\u00e1n\u00ed prvn\u00ed generace \u2013 Sangerovo sekvenov\u00e1n\u00ed <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=AhsIF-cmoQQ\" target=\"_blank\" rel=\"noopener\"> Projekt lidsk\u00e9ho genomu <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=WKAUtJQ69n8\" target=\"_blank\" rel=\"noopener\"> Sekvenov\u00e1n\u00ed druh\u00e9 generace <\/a>\r\n<ul>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=fCd6B5HRaZ8\" target=\"_blank\" rel=\"noopener\"> technologie firmy Illumina <\/a><\/li>\r\n<\/ul>\r\n<\/li>\r\n<li>Sekvenov\u00e1n\u00ed t\u0159et\u00ed generace\r\n<ul>\r\n<li>technologie firmy Oxford Nanopore Technology<\/li>\r\n<ul>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=E9-Rm5AoZGw\" target=\"_blank\" rel=\"noopener\"> video 1 <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=bS3NiFLwPqE\" target=\"_blank\" rel=\"noopener\"> video 2 <\/a><\/li>\r\n<\/ul>\r\n<\/ul>\r\n<ul>\r\n<li>technologie SMRT firmy PAcBio<\/li>\r\n<ul>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=NHCJ8PtYCFc\" target=\"_blank\" rel=\"noopener\"> video 1 <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=-nOr5B_bF3A\" target=\"_blank\" rel=\"noopener\"> video 2 <\/a><\/li>\r\n<\/ul>\r\n<\/ul>\r\n<\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=KASvlXYPCBI\" target=\"_blank\" rel=\"noopener\"> Co je to skl\u00e1d\u00e1n\u00ed genomu <\/a><\/li>\r\n<li><a href=\"https:\/\/www.youtube.com\/watch?v=6tw_JVz_IEc\" target=\"_blank\" rel=\"noopener\"> Jak m\u011bnit geny v laborato\u0159i \u2013 technologie CRISPR <\/a><\/li>\r\n<\/ul>\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","poduzly_count":0,"poduzly_count_aut":0},"129865":{"idvazba":"185869","nad_uzel":"129863","pod_uzel":"129865","url":"\/studium\/bakalarske","sablona":"49","nazev":"Bakal\u00e1\u0159sk\u00e9 studium na \u00fastavu 143","_url_prefix":"{\/\/uich.vscht.cz\/studium\/bakalarske}","poradi":"3","skupina_www":"everyone","platne_od":"13.08.2026 16:26:00","platne_do":null,"iduzel":"129865","obsah":"a:14:{s:5:\"nazev\";s:21:\"Bakal\u00e1\u0159sk\u00e9 studium\";s:9:\"seo_title\";s:36:\"Bakal\u00e1\u0159sk\u00e9 studium na \u00fastavu 143\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:793:\"<ul>\r\n<li><a href=\"https:\/\/studuj.vscht.cz\/prihlaska\/prihlaska-k-bakalarskemu-studiu\/\">podm\u00ednky p\u0159ijet\u00ed k bakal\u00e1\u0159sk\u00e9mu studiu<\/a>\r\n<ul>\r\n<li><a href=\"https:\/\/student.vscht.cz\/login.php?do=prihlaska\">elektronick\u00e1 p\u0159ihl\u00e1\u0161ka ke studiu<\/a><\/li>\r\n<\/ul>\r\n<small>Po\u010det student\u016f p\u0159ij\u00edman\u00fdch do studijn\u00edho programu nen\u00ed omezen. Informaci o kapacit\u011b ignorujte!<\/small><\/li>\r\n<\/ul>\r\n<p><\/p>\r\n<ul>\r\n<li>informace o studijn\u00edm programu <a href=\"https:\/\/studuj.vscht.cz\/studijni-programy\/program\/B107\/\"><em>Bioinformatika a chemick\u00e1 informatika (B107)<\/em><\/a>\r\n<ul>\r\n<li><a href=\"https:\/\/studuj.vscht.cz\/studijni-programy\/studijni-plan\/B107\/\">aktu\u00e1ln\u00ed studijn\u00ed pl\u00e1n<\/a> programu B107<\/li>\r\n<\/ul>\r\n<\/li>\r\n<\/ul>\r\n<p><\/p>\r\n<ul>\r\n<li>aktu\u00e1ln\u00ed t\u00e9mata bakal\u00e1\u0159sk\u00fdch prac\u00ed<\/li>\r\n<\/ul>\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:0:\"\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","poduzly_count":0,"poduzly_count_aut":0},"129866":{"idvazba":"159542","nad_uzel":"129863","pod_uzel":"129866","url":"\/studium\/magisterske","sablona":"49","nazev":"Magistersk\u00e9 studium na \u00fastavu 143","_url_prefix":"{\/\/uich.vscht.cz\/studium\/magisterske}","poradi":"4","skupina_www":"everyone","platne_od":"13.08.2026 16:26:00","platne_do":null,"iduzel":"129866","obsah":"a:14:{s:5:\"nazev\";s:20:\"Magistersk\u00e9 studium\";s:9:\"seo_title\";s:35:\"Magistersk\u00e9 studium na \u00fastavu 143\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:789:\"<ul>\r\n<li><a href=\"https:\/\/studuj.vscht.cz\/prihlaska\/prihlaska-k-magisterskemu-studiu\">podm\u00ednky p\u0159ijet\u00ed k magistersk\u00e9mu studiu<\/a>\r\n<ul>\r\n<li><a href=\"https:\/\/student.vscht.cz\/login.php?do=prihlaska\">elektronick\u00e1 p\u0159ihl\u00e1\u0161ka ke studiu<\/a><\/li>\r\n<\/ul>\r\n<small>Po\u010det student\u016f p\u0159ij\u00edman\u00fdch do studijn\u00edho programu nen\u00ed omezen. Informaci o kapacit\u011b ignorujte!<\/small><\/li>\r\n<\/ul>\r\n<p><\/p>\r\n<ul>\r\n<li>informace o studijn\u00edm programu <a href=\"https:\/\/studuj.vscht.cz\/studijni-programy\/program\/N106\/\"><em>Bioinformatika a chemick\u00e1 informatika (N106)<\/em><\/a>\r\n<ul>\r\n<li><a href=\"https:\/\/studuj.vscht.cz\/studijni-programy\/studijni-plan\/N106\/\">aktu\u00e1ln\u00ed studijn\u00ed pl\u00e1n<\/a> programu N106<\/li>\r\n<\/ul>\r\n<\/li>\r\n<\/ul>\r\n<p><\/p>\r\n<ul>\r\n<li>aktu\u00e1ln\u00ed t\u00e9mata diplomov\u00fdch prac\u00ed<\/li>\r\n<\/ul>\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:3344:\"<h2>Informace pro z\u00e1jemce z jin\u00fdch \u0161kol \u010di jin\u00fdch studijn\u00edch program\u016f<\/h2>\r\n<p>Pros\u00edme z\u00e1jemce, kte\u0159\u00ed by r\u00e1di nastoupili na magistersk\u00fd studijn\u00ed program Bioinformatika a chemick\u00e1 informatika, ale neabsolvovali p\u0159edchoz\u00ed bakal\u00e1\u0159sk\u00fd studijn\u00ed program Bioinformatika a chemick\u00e1 informatika na V\u0160CHT (p\u0159ich\u00e1z\u00ed tedy bu\u010f z jin\u00e9 \u0161koly, nebo z V\u0160CHT, ale z jin\u00e9ho Bc. programu), aby <span style=\"color: red;\"><strong>kontaktovali garanta oboru prof. D. Svozila (svozild@vscht.cz)<\/strong><\/span>. N\u00e1sleduj\u00edc\u00ed informace jsou obecn\u011bj\u0161\u00edho charakteru, konkr\u00e9tn\u00ed podobu studia je t\u0159eba <span style=\"color: red;\"><strong>osobn\u011b domluvit<\/strong><\/span> s ka\u017ed\u00fdm z\u00e1jemcem.<\/p>\r\n<p>Pokud jste neabsolvovali p\u0159edchoz\u00ed Bc. studijn\u00ed program <em>Bioinformatika a chemick\u00e1 informatika<\/em> na V\u0160CHT, s nejv\u011bt\u0161\u00ed pravd\u011bpodobnost\u00ed budete muset absolvovat p\u0159ij\u00edmac\u00ed \u0159\u00edzen\u00ed, o kter\u00e9m najdete v\u00edce informac\u00ed <a href=\"https:\/\/studuj.vscht.cz\/prihlaska\/prihlaska-k-magisterskemu-studiu\/#odborna-zkouska\">na webu studuj.vscht.cz v sekci \u201eP\u0159ij\u00edmac\u00ed odborn\u00e1 zkou\u0161ka\u201c<\/a>, p\u0159\u00edpadn\u011b <a href=\"https:\/\/fcht.vscht.cz\/chci-studovat\/MGR\/prijimaci-rizeni-mgr-studium\">specificky p\u0159\u00edmo pro fakultu<\/a>. P\u0159ij\u00edmac\u00ed \u0159\u00edzen\u00ed do programu <em>Bioinformatika a chemick\u00e1 informatika<\/em> sest\u00e1v\u00e1 ze t\u0159\u00ed okruh\u016f \u2013 <em>Biochemie a molekul\u00e1rn\u00ed biologie<\/em>, <em>Programovac\u00ed techniky<\/em> a <em>Anal\u00fdza dat<\/em> (<a href=\"\/files\/uzel\/0129866\/0001~~8zM0MFNwyszPzEvLL8pNLMnMTlTIS83OTc3LLzu8FwA.pdf\">bli\u017e\u0161\u00ed specifikace t\u011bchto okruh\u016f<\/a>). C\u00edlem p\u0159ij\u00edmac\u00edho \u0159\u00edzen\u00ed je zajistit, aby znalosti v\u0161ech student\u016f, kte\u0159\u00ed budou v pr\u016fb\u011bhu Mgr. studia nav\u0161t\u011bvovat specializa\u010dn\u00ed bioinformatick\u00e9 p\u0159edn\u00e1\u0161ky, byly na stejn\u00e9 \u00farovni. Ve va\u0161em Mgr. studiu tak mohou v z\u00e1sad\u011b nastat dv\u011b alternativy:<\/p>\r\n<ol>\r\n<li>Mgr. studium trvaj\u00edc\u00ed <b>2 roky<\/b>. M\u00e1te pot\u0159ebn\u00e9 znalosti jak z p\u0159\u00edrodn\u00edch v\u011bd, tak z informa\u010dn\u00edch technologi\u00ed (p\u0159edev\u0161\u00edm jste schopni programovat) a z anal\u00fdzy dat (statistika a metody vyt\u011b\u017eov\u00e1n\u00ed znalost\u00ed z dat). Pak nastoup\u00edte na \u0159\u00e1dn\u00e9 Mgr. studium, kter\u00e9 trv\u00e1 dva roky. V p\u0159\u00edpad\u011b, \u017ee m\u00e1te nedostatky z n\u011bjak\u00e9 mal\u00e9 oblasti (nap\u0159. vyt\u011b\u017eov\u00e1n\u00ed znalost\u00ed z dat), je st\u00e1le mo\u017en\u00e9 studovat dva roky. Bude v\u00e1m v\u0161ak sestaven individu\u00e1ln\u00ed studijn\u00ed pl\u00e1n (ISP), v r\u00e1mci n\u011bho\u017e si na jedn\u00e9\/dvou p\u0159edn\u00e1\u0161k\u00e1ch pot\u0159ebn\u00e9 znalosti dopln\u00edte.<\/li>\r\n<li>Mgr. studium trvaj\u00edc\u00ed <b>3 roky<\/b>. Pokud v\u00e1m chyb\u00ed znalosti v cel\u00e9 \u0161\u00ed\u0159i jednoho kompletn\u00edho okruhu (typicky \"Programovac\u00ed techniky\", tj. s po\u010d\u00edta\u010dem um\u00edte pracovat pouze na u\u017eivatelsk\u00e9 \u00farovni), bude v\u00e1m sestaven ISP v d\u00e9lce t\u0159\u00ed let. Prvn\u00ed ro\u010dn\u00edk bude \"rozlo\u017een\" do dvou let, kdy b\u011bhem prvn\u00edho roku budete nav\u0161t\u011bvovat p\u0159edev\u0161\u00edm informatick\u00e9 p\u0159edn\u00e1\u0161ky, v nich\u017e se nau\u010d\u00edte z\u00e1klad\u016fm opera\u010dn\u00edch syst\u00e9m\u016f, po\u010d\u00edta\u010dov\u00fdch s\u00edt\u00ed, programov\u00e1n\u00ed, datab\u00e1z\u00ed a vyt\u011b\u017eov\u00e1n\u00ed znalost\u00ed z dat. Tato \u010d\u00e1st se typicky sest\u00e1v\u00e1 z n\u00e1sleduj\u00edc\u00edch p\u0159edn\u00e1\u0161ek, z nich\u017e v\u011bt\u0161ina je zaji\u0161\u0165ov\u00e1na pedagogy V\u0160CHT: <em>Programov\u00e1n\u00ed v shellu<\/em> (V\u0160CHT), <em>Z\u00e1klady programov\u00e1n\u00ed<\/em> a <em>Aplikovan\u00e9 programov\u00e1n\u00ed<\/em> (V\u0160CHT), <em>Datab\u00e1zov\u00e9 syst\u00e9my<\/em> (FIT \u010cVUT) a <em>Vyt\u011b\u017eov\u00e1n\u00ed znalost\u00ed z dat<\/em> (FIT \u010cVUT).<\/li>\r\n<\/ol>\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","poduzly_count":0,"poduzly_count_aut":0},"129867":{"idvazba":"159543","nad_uzel":"129863","pod_uzel":"129867","url":"\/studium\/doktorske","sablona":"49","nazev":"Doktorsk\u00e9 studium na \u00fastavu 143","_url_prefix":"{\/\/uich.vscht.cz\/studium\/doktorske}","poradi":"5","skupina_www":"everyone","platne_od":"07.08.2026 14:53:00","platne_do":null,"iduzel":"129867","obsah":"a:14:{s:5:\"nazev\";s:18:\"Doktorsk\u00e9 studium\";s:9:\"seo_title\";s:33:\"Doktorsk\u00e9 studium na \u00fastavu 143\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:244:\"<ul>\r\n<li>informace o studijn\u00edm programu <a href=\"https:\/\/phd.vscht.cz\/zajemci\/studijni-programy-a-temata-vypsanych-praci\/program\/22310\/D107\"><em>Bioinformatika (D107)<\/em><\/a> (v\u010detn\u011b aktu\u00e1ln\u011b vypsan\u00fdch dizerta\u010dn\u00edch prac\u00ed)<\/li>\r\n<\/ul>\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:0:\"\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","poduzly_count":0,"poduzly_count_aut":0}}},"129868":{"idvazba":"159544","nad_uzel":"129850","pod_uzel":"129868","url":"\/vyzkum","sablona":"49","nazev":"V\u00fdzkum na \u00fastavu","_url_prefix":"{\/\/uich.vscht.cz\/vyzkum}","poradi":"3","skupina_www":"everyone","platne_od":"16.03.2026 01:52:20.501204","platne_do":null,"iduzel":"129868","obsah":"a:14:{s:5:\"nazev\";s:18:\"V\u00fdzkum na \u00fastavu\";s:9:\"seo_title\";s:18:\"V\u00fdzkum na \u00fastavu\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:0:\"\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:0:\"\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","pod_uzly":["129869","129870","143383","151089","129874"],"poduzly_count":5,"poduzly_count_aut":4,"poduzly":{"poduzly_count_aut_sum":4,"129869":{"idvazba":"159545","nad_uzel":"129868","pod_uzel":"129869","url":"","sablona":"4","nazev":"[box] v\u00fdpis pod\u0159\u00edzen\u00fdch str\u00e1nek","_url_prefix":null,"poradi":"0","skupina_www":"everyone","platne_od":"16.03.2026 01:52:20.509269","platne_do":null,"iduzel":"129869","obsah":"a:6:{s:5:\"nazev\";s:0:\"\";s:12:\"barva_pozadi\";s:7:\"cervena\";s:8:\"uslideru\";s:5:\"false\";s:10:\"podstranky\";s:4:\"true\";s:6:\"sticky\";s:0:\"\";s:4:\"text\";s:0:\"\";}","class":"infobox","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0},"129870":{"idvazba":"159546","nad_uzel":"129868","pod_uzel":"129870","url":"\/vyzkum\/publikace","sablona":"49","nazev":"Publikace","_url_prefix":"{\/\/uich.vscht.cz\/vyzkum\/publikace}","poradi":"1","skupina_www":"everyone","platne_od":"22.10.2026 13:15:00","platne_do":null,"iduzel":"129870","obsah":"a:14:{s:5:\"nazev\";s:17:\"Publikace \u00fastavu\";s:9:\"seo_title\";s:9:\"Publikace\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:5:\"perex\";s:0:\"\";s:5:\"obsah\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","pod_uzly":["151136","151135","150893"],"poduzly_count":3,"poduzly_count_aut":0,"poduzly":{"poduzly_count_aut_sum":0,"151136":{"idvazba":"186450","nad_uzel":"129870","pod_uzel":"151136","url":"","sablona":"47","nazev":"Publikace skupiny Chemoinformatika","_url_prefix":null,"poradi":"0","skupina_www":"everyone","platne_od":"22.10.2026 13:12:00","platne_do":null,"iduzel":"151136","class":"infotext","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0},"151135":{"idvazba":"186452","nad_uzel":"129870","pod_uzel":"151135","url":"","sablona":"47","nazev":"publikace chemoinfo (link)","_url_prefix":null,"poradi":"1","skupina_www":"everyone","platne_od":"22.10.2026 13:04:00","platne_do":null,"iduzel":"151135","obsah":"a:4:{s:5:\"nazev\";s:0:\"\";s:4:\"text\";s:7995:\"<ol>\r\n<li>McKenna, S. M.; \u0160\u00edcho, M.; van der Horst, C.; Maasland, J.; van der Nol, E.; Turco, G.; Bernatavicius, A.; van Westen, G. J.; Heitman, L. H.; Pomplun, S. J. Automated Parallel Synthesis Accelerates Virtual Screening Hit Discovery. <em>Journal of the American Chemical Society<\/em> <strong>2026<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1021\/jacs.6c05055\">10.1021\/jacs.6c05055<\/a>.<\/li>\r\n<li>Fil, V.; van den Broek, R. L.; \u0160\u00edcho, M.; \u010cmelo, I.; Lorente, M. I. A.; Jespers, W.; Van Westen, G. J. P.; Svozil, D. Scaffold-based evaluation metrics for fair comparison of molecular generators. <em>Journal of Cheminformatics<\/em> <strong>2026<\/strong>, <strong>18<\/strong> (1), 8-13. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-026-01213-6\">10.1186\/s13321-026-01213-6<\/a>.<\/li>\r\n<li>Essa, K.; van der Dussen, K. N.; Yao, Y.; Bleijs, B.; Zacarias, N. V. O.; Heitman, L. H.; van Westen, G. J.; Jespers, W.; van der Es, D.; \u0160\u00edcho, M. Combining AlphaFold with Focused Virtual Library Design in the Development of Novel CCR2 and CCR5 Antagonists. <em>Journal of Chemical Information and Modeling<\/em> <strong>2025<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.5c01596\">10.1021\/acs.jcim.5c01596<\/a>.<\/li>\r\n<li>F\u00fcl\u00f6p, J.; \u0160\u00edcho, M.; Dehaen, W. TEMPL: A Template-Based Protein\u2013Ligand Pose Prediction Baseline. <em>Journal of Chemical Information and Modeling<\/em> <strong>2025<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.5c01985\">10.1021\/acs.jcim.5c01985<\/a>.<\/li>\r\n<li>Hassen, A. K.; \u0160\u00edcho, M.; van Aalst, Y. J.; Huizenga, M. C. W.; Reynolds, D. N. R.; Luukkonen, S.; Bernatavicius, A.; Clevert, D.-A.; Janssen, A. P. A.; van Westen, G. J. P.; Preuss, M. Generate what you can make: achieving in-house synthesizability with readily available resources in de novo drug design. <em>Journal of Cheminformatics<\/em> <strong>2025<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-024-00910-4\">10.1186\/s13321-024-00910-4<\/a>.<\/li>\r\n<li>van den Maagdenberg, H. W.; \u0160\u00edcho, M.; Araripe, D. A.; Luukkonen, S.; Schoenmaker, L.; Jespers, M.; B\u00e9quignon, O. J. M.; Gonz\u00e1lez, M. G.; van den Broek, R. L.; Bernatavicius, A.; van Hasselt, J. G. C.; van der Graaf, P. H.; van Westen, G. J. P. QSPRpred: a Flexible Open-Source Quantitative Structure-Property Relationship Modelling Tool. <em>Journal of Cheminformatics<\/em> <strong>2024<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-024-00908-y\">10.1186\/s13321-024-00908-y<\/a>.<\/li>\r\n<li>Hunklinger, A.; Hartog, P.; \u0160\u00edcho, M.; Godin, G.; Igor, V Tetko. The openOCHEM consensus model is the best-performing open-source predictive model in the First EUOS\/SLAS joint compound solubility challenge. <em>SLAS Discovery<\/em> <strong>2024<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1016\/j.slasd.2024.01.005\">10.1016\/j.slasd.2024.01.005<\/a>.<\/li>\r\n<li>Agea, M.; \u010cmelo, I.; Dehaen, W.; Chen, Y.; Kirchmair, J.; Sedl\u00e1k, D.; Bart\u016fn\u011bk, P.; \u0160\u00edcho, M.; Svozil, D. Chemical space exploration with Molpher: Generating and assessing a glucocorticoid receptor ligand library. <em>Molecular Informatics<\/em> <strong>2024<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1002\/minf.202300316\">10.1002\/minf.202300316<\/a>.<\/li>\r\n<li>Bernatavicius, A.; \u0160\u00edcho, M.; Janssen, A.; Hassen, A.; Preuss, M.; van Westen, G. AlphaFold Meets De Novo Drug Design: Leveraging Structural Protein Information in Multitarget Molecular Generative Models. <em>Journal of Chemical Information and Modeling<\/em> <strong>2024<\/strong>, <strong>64<\/strong> (21), 8113-8122. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.4c00309\">10.1021\/acs.jcim.4c00309<\/a>.<\/li>\r\n<li>\u0160\u00edcho, M.; Luukkonen, S.; van den Maagdenberg, H.; Schoenmaker, L.; B\u00e9quignon, O.; van Westen, G. DrugEx: Deep Learning Models and Tools for Exploration of Drug-Like Chemical Space. <em>Journal of Chemical Information and Modeling<\/em> <strong>2023<\/strong>, <strong>63<\/strong> (12), 3629-3636. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.3c00434\">10.1021\/acs.jcim.3c00434<\/a>.<\/li>\r\n<li>\u0160\u00edcho, M.; Liu, X.; Svozil, D.; van Westen, G. J. P. GenUI: interactive and extensible open source software platform for de novo molecular generation and cheminformatics. <em>Journal of Cheminformatics<\/em> <strong>2021<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-021-00550-y\">10.1186\/s13321-021-00550-y<\/a>.<\/li>\r\n<li>Plonka, W.; Stork, C.; \u0160\u00edcho, M.; Kirchmair, J. CYPlebrity: Machine learning models for the prediction of inhibitors of cytochrome P450 enzymes. <em>BIOORGANIC & MEDICINAL CHEMISTRY<\/em> <strong>2021<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1016\/j.bmc.2021.116388\">10.1016\/j.bmc.2021.116388<\/a>.<\/li>\r\n<li>NERDD: a web portal providing access to in silico tools for drug discovery. <em>Bioinformatics (Oxford, England)<\/em> <strong>2020<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1093\/bioinformatics\/btz695\">10.1093\/bioinformatics\/btz695<\/a>.<\/li>\r\n<li>Kops, C. D. B.; \u0160\u00edcho, M.; Mazzolari, A.; Kirchmair, J. GLORYx: Prediction of the Metabolites Resulting from Phase 1 and Phase 2 Biotransformations of Xenobiotics. <em>Chemical Research in Toxicology<\/em> <strong>2020<\/strong>, <strong>34<\/strong> (2), 286-299. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.chemrestox.0c00224\">10.1021\/acs.chemrestox.0c00224<\/a>.<\/li>\r\n<li>GLORY: Generator of the Structures of Likely Cytochrome P450 Metabolites Based on Predicted Sites of Metabolism. <em>Frontiers in chemistry<\/em> <strong>2019<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.3389\/fchem.2019.00402\">10.3389\/fchem.2019.00402<\/a>.<\/li>\r\n<li>Stork, C.; Chen, Y.; \u0160\u00edcho, M.; Kirchmair, J. Hit Dexter 2.0: Machine-Learning Models for the Prediction of Frequent Hitters. <em>Journal of Chemical Information and Modeling<\/em> <strong>2019<\/strong>, <strong>59<\/strong> (3), 1030-1043. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.8b00677\">10.1021\/acs.jcim.8b00677<\/a>.<\/li>\r\n<li>\u0160\u00edcho, M.; Stork, C.; Mazzolari, A.; De Bruyn Kops, C.; Pedretti, A.; Testa, B.; Vistoli, G.; Svozil, D.; Kirchmair, J. FAME 3: Predicting the Sites of Metabolism in Synthetic Compounds and Natural Products for Phase 1 and Phase 2 Metabolic Enzymes. <em>Journal of Chemical Information and Modeling<\/em> <strong>2019<\/strong>, <strong>59<\/strong> (8), 3400-3412. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.9b00376\">10.1021\/acs.jcim.9b00376<\/a>.<\/li>\r\n<li>Comment on \"The power metric: a new statistically robust enrichment-type metric for virtual screening applications with early recovery capability\". <em>Journal of cheminformatics<\/em> <strong>2018<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-018-0267-x\">10.1186\/s13321-018-0267-x<\/a>.<\/li>\r\n<li>Stork, C.; Wagner, J.; Friedrich, N.-O.; de Bruyn Kops, C.; \u0160\u00edcho, M.; Kirchmair, J. Hit Dexter: A Machine-Learning Model for the Prediction of Frequent Hitters. <em>ChemMedChem<\/em> <strong>2018<\/strong>, <strong>13<\/strong> (6), 564-571. DOI: <a href=\"https:\/\/doi.org\/10.1002\/cmdc.201700673\">10.1002\/cmdc.201700673<\/a>.<\/li>\r\n<li>Molecular docking as a tool to virtually develop drugs. <em>Chemicke Listy<\/em> <strong>2017<\/strong>, <strong>111<\/strong>, 754-759.<\/li>\r\n<li>\u0160\u00edcho, M.; Svozil, D. MOLEKULOV\u00c9 DOKOV\u00c1N\u00cd JAKO N\u00c1STROJ PRO VIRTU\u00c1LN\u00cd N\u00c1VRH L\u00c9\u010cIV. <em>Chemick\u00e9 listy<\/em> <strong>2017<\/strong>, <strong>111<\/strong> (11), 754-759.<\/li>\r\n<li>\u0160\u00edcho, M.; Kops, C. D. B.; Stork, C.; Svozil, D.; Kirchmair, J. FAME 2: Simple and Effective Machine Learning Model of Cytochrome P450 Regioselectivity. <em>Journal of Chemical Information and Modeling<\/em> <strong>2017<\/strong>, <strong>57<\/strong> (8), 1832-1846. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.7b00250\">10.1021\/acs.jcim.7b00250<\/a>.<\/li>\r\n<li>\u0160\u00edcho, M.; Svozil, D.; Hoksza, D. Activity-driven exploration of chemical space with morphing. In <em>Proceedings - 2015 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2015<\/em>; 2015; pp 1024-1031. DOI: <a href=\"https:\/\/doi.org\/10.1109\/BIBM.2015.7359824\">10.1109\/BIBM.2015.7359824<\/a>.<\/li>\r\n<\/ol>\";s:7:\"bg_gray\";s:1:\"0\";s:12:\"barva_pozadi\";s:4:\"bila\";}","class":"infotext","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0},"150893":{"idvazba":"186127","nad_uzel":"129870","pod_uzel":"150893","url":"","sablona":"47","nazev":"Publikace skupiny Biomolekul\u00e1rn\u00ed modelov\u00e1n\u00ed","_url_prefix":null,"poradi":"2","skupina_www":"everyone","platne_od":"22.10.2026 12:45:00","platne_do":null,"iduzel":"150893","class":"infotext","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0}}},"143383":{"idvazba":"177010","nad_uzel":"129868","pod_uzel":"143383","url":"\/vyzkum\/chemoinformatika","sablona":"49","nazev":"Chemoinformatika","_url_prefix":"{\/\/uich.vscht.cz\/vyzkum\/chemoinformatika}","poradi":"2","skupina_www":"everyone","platne_od":"05.08.2026 14:29:00","platne_do":null,"iduzel":"143383","obsah":"a:14:{s:5:\"nazev\";s:16:\"Chemoinformatika\";s:9:\"seo_title\";s:16:\"Chemoinformatika\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"perex\";s:0:\"\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:39:\"0002~~S85Izc3PzEvLj8_MKS0uKUpMTgUA.jpeg\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:5:\"obsah\";s:1005:\"<p>Na\u0161e v\u00fdzkumn\u00e1 skupina se zam\u011b\u0159uje na propojov\u00e1n\u00ed chemick\u00fdch a biologick\u00fdch v\u011bd s modern\u00edmi informa\u010dn\u00edmi technologiemi. Zkoum\u00e1me a vyv\u00edj\u00edme metody datov\u00e9 anal\u00fdzy a strojov\u00e9ho u\u010den\u00ed specificky pro pot\u0159eby farmaceutick\u00e9ho pr\u016fmyslu a v\u00fdvoje l\u00e9\u010div. Nicm\u00e9n\u011b nejsou n\u00e1m ciz\u00ed ani n\u00e1stroje jako je molekulov\u00e9 dokov\u00e1n\u00ed nebo molekulov\u00e9 simulace na atom\u00e1rn\u00ed \u00farovni.<\/p>\r\n<p>V\u00fdzkum ve skupin\u011b je t\u00e9\u017e doprov\u00e1zen v\u00fdvojem cel\u00e9 \u0159ady specializovan\u00e9ho softwaru pro automatizaci ukl\u00e1d\u00e1n\u00ed a zpracov\u00e1n\u00ed chemick\u00fdch dat.<\/p>\r\n<p>V r\u00e1mci skupiny m\u00e1me t\u00e9\u017e dlouhodob\u00e9 tuzemsk\u00e9 i zahrani\u010dn\u00ed spolupr\u00e1ce, do kter\u00fdch je zapojeno mnoho odborn\u00edk\u016f z Evropy i ze sv\u011bta, kte\u0159\u00ed \u0159e\u0161\u00ed nejr\u016fzn\u011bj\u0161\u00ed probl\u00e9my od v\u00fdvoje l\u00e9\u010div po materi\u00e1lovou chemii.<\/p>\r\n<p>M\u00e1me t\u00e9\u017e p\u0159\u00edstup k modern\u00edmu vybaven\u00ed a hardware, co\u017e n\u00e1m d\u00e1v\u00e1 mo\u017enost vyv\u00edjet i n\u00e1ro\u010dn\u011bj\u0161\u00ed metody um\u011bl\u00e9 inteligence.<\/p>\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","pod_uzly":["143572","143573","143571"],"poduzly_count":3,"poduzly_count_aut":2,"poduzly":{"poduzly_count_aut_sum":0,"143572":{"idvazba":"177008","nad_uzel":"143383","pod_uzel":"143572","url":"","sablona":"4","nazev":"Chemoinformatika","_url_prefix":null,"poradi":"0","skupina_www":"everyone","platne_od":"14.08.2026 13:19:00","platne_do":null,"iduzel":"143572","class":"infobox","autonomni":"0","poduzly_count":0,"poduzly_count_aut":0},"143573":{"idvazba":"177014","nad_uzel":"143383","pod_uzel":"143573","url":"\/vyzkum\/chemoinformatika\/software","sablona":"58","nazev":"Software","_url_prefix":"{\/\/uich.vscht.cz\/vyzkum\/chemoinformatika\/software}","poradi":"1","skupina_www":"everyone","platne_od":"20.10.2026 11:31:00","platne_do":null,"iduzel":"143573","obsah":"a:14:{s:5:\"nazev\";s:8:\"Software\";s:9:\"seo_title\";s:8:\"Software\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:5:\"perex\";s:0:\"\";s:5:\"obsah\";s:2793:\"<h2><a id=\"qsprpred\"><\/a><a href=\"https:\/\/github.com\/CDDLeiden\/QSPRPred\">QSPRpred<\/a><\/h2>\r\n<p>QSPRpred je open-source knihovna v Pythonu ur\u010den\u00e1 k vytv\u00e1\u0159en\u00ed, tr\u00e9nov\u00e1n\u00ed a nasazov\u00e1n\u00ed model\u016f QSPR\/QSAR (vztah\u016f mezi chemickou strukturou a vlastnostmi \u010di aktivitou l\u00e1tek). Byla vyvinuta ve spolupr\u00e1ci se skupinou pro po\u010d\u00edta\u010dov\u00fd v\u00fdvoj l\u00e9\u010div na Univerzit\u011b v Leidenu a usnad\u0148uje pracovn\u00ed postupy strojov\u00e9ho u\u010den\u00ed automatizac\u00ed p\u0159\u00edpravy dat, v\u00fdpo\u010dtu molekul\u00e1rn\u00edch deskriptor\u016f a ukl\u00e1d\u00e1n\u00ed model\u016f r\u016fzn\u00fdch typ\u016f.<\/p>\r\n<h2><a id=\"genui\"><\/a><a href=\"https:\/\/github.com\/martin-sicho\/genui\">GenUI<\/a><\/h2>\r\n<p>GenUI je webov\u00e1 platforma a REST API rozhran\u00ed navr\u017een\u00e9 pro spr\u00e1vu a vizualizaci proces\u016f v generativn\u00ed chemii, QSAR modelov\u00e1n\u00ed a prozkoum\u00e1v\u00e1n\u00ed chemick\u00e9ho prostoru. Jedn\u00e1 se o pokus o snadn\u011bj\u0161\u00ed propojen\u00ed u\u017eivatel\u016f s algoritmy generov\u00e1n\u00ed molekul pomoc\u00ed u\u017eivatelsk\u00e9ho rozhran\u00ed.<\/p>\r\n<h2><a id=\"drugex\"><\/a><a href=\"https:\/\/github.com\/CDDLeiden\/DrugEx\">DrugEx<\/a><\/h2>\r\n<p>DrugEx (Drug Explorer) je bal\u00ed\u010dek vyu\u017e\u00edvaj\u00edc\u00ed hlubok\u00e9 u\u010den\u00ed a v\u00edcekrit\u00e9riov\u00e9ho reinforcment learningu pro n\u00e1vrh nov\u00fdch molekul l\u00e9\u010div (<em>de novo<\/em> design) za pomoci architektur jako rekurentn\u00ed neuronov\u00e9 s\u00edt\u011b a transformery. Umo\u017e\u0148uje v\u011bdc\u016fm generovat zcela nov\u00e9 struktury molekul optimalizovan\u00e9 pro konkr\u00e9tn\u00ed biologickou aktivitu a po\u017eadovan\u00e9 fyzik\u00e1ln\u011b-chemick\u00e9 vlastnosti.<\/p>\r\n<h2><a id=\"molpher\"><\/a><a href=\"https:\/\/app.assembla.com\/spaces\/molpher\/wiki\" target=\"_blank\" rel=\"noopener\">Molpher<\/a> & <a href=\"https:\/\/lich-uct.github.io\/molpher-lib\/\" target=\"_blank\" rel=\"noopener\">molpher-lib<\/a><\/h2>\r\n<p>Chemick\u00fd prostor je mno\u017eina v\u0161ech mo\u017en\u00fdch stabiln\u00edch organick\u00fdch slou\u010denin. Jeho velikost je enormn\u00ed, nap\u0159. po\u010det slou\u010denin s molekulovou hmotnost\u00ed men\u0161\u00ed ne\u017e 500 Da se odhaduje na 10<sup>60<\/sup>. Naprosto drtiv\u00e1 v\u011bt\u0161ina t\u011bchto struktur v\u0161ak nebyla dosud ani navr\u017eena, nato\u017e pak syntetizov\u00e1na a charakterizov\u00e1na. Proto jsme vyvinuli metodu molekul\u00e1rn\u00edho morfingu [Hoksza D. et al. <em><span class=\"journalname\">Journal of Cheminformatics<\/span><\/em> <span class=\"journalissue\">6<\/span> : 7 2014. DOI: <a href=\"https:\/\/doi.org\/10.1186\/1758-2946-6-7\" target=\"_blank\" rel=\"noopener\">10.1186\/1758-2946-6-7<\/a>], kter\u00e1 slou\u017e\u00ed ke generov\u00e1n\u00ed virtu\u00e1ln\u00edch struktur mezi dv\u011bma dan\u00fdmi slou\u010deninami. Tato metoda je naimplementov\u00e1na ve voln\u011b dostupn\u00e9m programu <a href=\"https:\/\/app.assembla.com\/spaces\/molpher\/wiki\" target=\"_blank\" rel=\"noopener\">Molpher<\/a> a je t\u00e9\u017e dostupn\u00e1 z programovac\u00edho jazyka Python pomoc\u00ed knihovny <a href=\"https:\/\/lich-uct.github.io\/molpher-lib\/\" target=\"_blank\" rel=\"noopener\">molpher-lib<\/a>.<\/p>\r\n<p><\/p>\";s:6:\"pozadi\";s:0:\"\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_obrazek","autonomni":"1","poduzly_count":0,"poduzly_count_aut":0},"143571":{"idvazba":"177011","nad_uzel":"143383","pod_uzel":"143571","url":"\/vyzkum\/chemoinformatika\/publikace","sablona":"49","nazev":"Publikace","_url_prefix":"{\/\/uich.vscht.cz\/vyzkum\/chemoinformatika\/publikace}","poradi":"2","skupina_www":"everyone","platne_od":"23.10.2026 17:22:00","platne_do":null,"iduzel":"143571","obsah":"a:14:{s:5:\"nazev\";s:34:\"Publikace skupiny Chemoinformatika\";s:9:\"seo_title\";s:9:\"Publikace\";s:8:\"seo_desc\";s:0:\"\";s:5:\"autor\";s:0:\"\";s:11:\"autor_email\";s:0:\"\";s:8:\"autor_no\";s:1:\"1\";s:5:\"ikona\";s:0:\"\";s:7:\"obrazek\";s:0:\"\";s:5:\"vyska\";s:2:\"md\";s:9:\"ogobrazek\";s:0:\"\";s:5:\"perex\";s:0:\"\";s:5:\"obsah\";s:0:\"\";s:6:\"pozadi\";s:0:\"\";s:13:\"urlnadstranka\";s:0:\"\";}","class":"stranka_kontejnery","autonomni":"1","pod_uzly":["151135"],"poduzly_count":1,"poduzly_count_aut":0,"poduzly":{"poduzly_count_aut_sum":0,"151135":{"idvazba":"186452","nad_uzel":"129870","pod_uzel":"151135","url":"","sablona":"47","nazev":"publikace chemoinfo (link)","_url_prefix":null,"poradi":"1","skupina_www":"everyone","platne_od":"22.10.2026 13:04:00","platne_do":null,"iduzel":"151135","obsah":"a:4:{s:5:\"nazev\";s:0:\"\";s:4:\"text\";s:7995:\"<ol>\r\n<li>McKenna, S. M.; \u0160\u00edcho, M.; van der Horst, C.; Maasland, J.; van der Nol, E.; Turco, G.; Bernatavicius, A.; van Westen, G. J.; Heitman, L. H.; Pomplun, S. J. Automated Parallel Synthesis Accelerates Virtual Screening Hit Discovery. <em>Journal of the American Chemical Society<\/em> <strong>2026<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1021\/jacs.6c05055\">10.1021\/jacs.6c05055<\/a>.<\/li>\r\n<li>Fil, V.; van den Broek, R. L.; \u0160\u00edcho, M.; \u010cmelo, I.; Lorente, M. I. A.; Jespers, W.; Van Westen, G. J. P.; Svozil, D. Scaffold-based evaluation metrics for fair comparison of molecular generators. <em>Journal of Cheminformatics<\/em> <strong>2026<\/strong>, <strong>18<\/strong> (1), 8-13. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-026-01213-6\">10.1186\/s13321-026-01213-6<\/a>.<\/li>\r\n<li>Essa, K.; van der Dussen, K. N.; Yao, Y.; Bleijs, B.; Zacarias, N. V. O.; Heitman, L. H.; van Westen, G. J.; Jespers, W.; van der Es, D.; \u0160\u00edcho, M. Combining AlphaFold with Focused Virtual Library Design in the Development of Novel CCR2 and CCR5 Antagonists. <em>Journal of Chemical Information and Modeling<\/em> <strong>2025<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.5c01596\">10.1021\/acs.jcim.5c01596<\/a>.<\/li>\r\n<li>F\u00fcl\u00f6p, J.; \u0160\u00edcho, M.; Dehaen, W. TEMPL: A Template-Based Protein\u2013Ligand Pose Prediction Baseline. <em>Journal of Chemical Information and Modeling<\/em> <strong>2025<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.5c01985\">10.1021\/acs.jcim.5c01985<\/a>.<\/li>\r\n<li>Hassen, A. K.; \u0160\u00edcho, M.; van Aalst, Y. J.; Huizenga, M. C. W.; Reynolds, D. N. R.; Luukkonen, S.; Bernatavicius, A.; Clevert, D.-A.; Janssen, A. P. A.; van Westen, G. J. P.; Preuss, M. Generate what you can make: achieving in-house synthesizability with readily available resources in de novo drug design. <em>Journal of Cheminformatics<\/em> <strong>2025<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-024-00910-4\">10.1186\/s13321-024-00910-4<\/a>.<\/li>\r\n<li>van den Maagdenberg, H. W.; \u0160\u00edcho, M.; Araripe, D. A.; Luukkonen, S.; Schoenmaker, L.; Jespers, M.; B\u00e9quignon, O. J. M.; Gonz\u00e1lez, M. G.; van den Broek, R. L.; Bernatavicius, A.; van Hasselt, J. G. C.; van der Graaf, P. H.; van Westen, G. J. P. QSPRpred: a Flexible Open-Source Quantitative Structure-Property Relationship Modelling Tool. <em>Journal of Cheminformatics<\/em> <strong>2024<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-024-00908-y\">10.1186\/s13321-024-00908-y<\/a>.<\/li>\r\n<li>Hunklinger, A.; Hartog, P.; \u0160\u00edcho, M.; Godin, G.; Igor, V Tetko. The openOCHEM consensus model is the best-performing open-source predictive model in the First EUOS\/SLAS joint compound solubility challenge. <em>SLAS Discovery<\/em> <strong>2024<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1016\/j.slasd.2024.01.005\">10.1016\/j.slasd.2024.01.005<\/a>.<\/li>\r\n<li>Agea, M.; \u010cmelo, I.; Dehaen, W.; Chen, Y.; Kirchmair, J.; Sedl\u00e1k, D.; Bart\u016fn\u011bk, P.; \u0160\u00edcho, M.; Svozil, D. Chemical space exploration with Molpher: Generating and assessing a glucocorticoid receptor ligand library. <em>Molecular Informatics<\/em> <strong>2024<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1002\/minf.202300316\">10.1002\/minf.202300316<\/a>.<\/li>\r\n<li>Bernatavicius, A.; \u0160\u00edcho, M.; Janssen, A.; Hassen, A.; Preuss, M.; van Westen, G. AlphaFold Meets De Novo Drug Design: Leveraging Structural Protein Information in Multitarget Molecular Generative Models. <em>Journal of Chemical Information and Modeling<\/em> <strong>2024<\/strong>, <strong>64<\/strong> (21), 8113-8122. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.4c00309\">10.1021\/acs.jcim.4c00309<\/a>.<\/li>\r\n<li>\u0160\u00edcho, M.; Luukkonen, S.; van den Maagdenberg, H.; Schoenmaker, L.; B\u00e9quignon, O.; van Westen, G. DrugEx: Deep Learning Models and Tools for Exploration of Drug-Like Chemical Space. <em>Journal of Chemical Information and Modeling<\/em> <strong>2023<\/strong>, <strong>63<\/strong> (12), 3629-3636. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.3c00434\">10.1021\/acs.jcim.3c00434<\/a>.<\/li>\r\n<li>\u0160\u00edcho, M.; Liu, X.; Svozil, D.; van Westen, G. J. P. GenUI: interactive and extensible open source software platform for de novo molecular generation and cheminformatics. <em>Journal of Cheminformatics<\/em> <strong>2021<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-021-00550-y\">10.1186\/s13321-021-00550-y<\/a>.<\/li>\r\n<li>Plonka, W.; Stork, C.; \u0160\u00edcho, M.; Kirchmair, J. CYPlebrity: Machine learning models for the prediction of inhibitors of cytochrome P450 enzymes. <em>BIOORGANIC & MEDICINAL CHEMISTRY<\/em> <strong>2021<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1016\/j.bmc.2021.116388\">10.1016\/j.bmc.2021.116388<\/a>.<\/li>\r\n<li>NERDD: a web portal providing access to in silico tools for drug discovery. <em>Bioinformatics (Oxford, England)<\/em> <strong>2020<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1093\/bioinformatics\/btz695\">10.1093\/bioinformatics\/btz695<\/a>.<\/li>\r\n<li>Kops, C. D. B.; \u0160\u00edcho, M.; Mazzolari, A.; Kirchmair, J. GLORYx: Prediction of the Metabolites Resulting from Phase 1 and Phase 2 Biotransformations of Xenobiotics. <em>Chemical Research in Toxicology<\/em> <strong>2020<\/strong>, <strong>34<\/strong> (2), 286-299. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.chemrestox.0c00224\">10.1021\/acs.chemrestox.0c00224<\/a>.<\/li>\r\n<li>GLORY: Generator of the Structures of Likely Cytochrome P450 Metabolites Based on Predicted Sites of Metabolism. <em>Frontiers in chemistry<\/em> <strong>2019<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.3389\/fchem.2019.00402\">10.3389\/fchem.2019.00402<\/a>.<\/li>\r\n<li>Stork, C.; Chen, Y.; \u0160\u00edcho, M.; Kirchmair, J. Hit Dexter 2.0: Machine-Learning Models for the Prediction of Frequent Hitters. <em>Journal of Chemical Information and Modeling<\/em> <strong>2019<\/strong>, <strong>59<\/strong> (3), 1030-1043. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.8b00677\">10.1021\/acs.jcim.8b00677<\/a>.<\/li>\r\n<li>\u0160\u00edcho, M.; Stork, C.; Mazzolari, A.; De Bruyn Kops, C.; Pedretti, A.; Testa, B.; Vistoli, G.; Svozil, D.; Kirchmair, J. FAME 3: Predicting the Sites of Metabolism in Synthetic Compounds and Natural Products for Phase 1 and Phase 2 Metabolic Enzymes. <em>Journal of Chemical Information and Modeling<\/em> <strong>2019<\/strong>, <strong>59<\/strong> (8), 3400-3412. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.9b00376\">10.1021\/acs.jcim.9b00376<\/a>.<\/li>\r\n<li>Comment on \"The power metric: a new statistically robust enrichment-type metric for virtual screening applications with early recovery capability\". <em>Journal of cheminformatics<\/em> <strong>2018<\/strong>. DOI: <a href=\"https:\/\/doi.org\/10.1186\/s13321-018-0267-x\">10.1186\/s13321-018-0267-x<\/a>.<\/li>\r\n<li>Stork, C.; Wagner, J.; Friedrich, N.-O.; de Bruyn Kops, C.; \u0160\u00edcho, M.; Kirchmair, J. Hit Dexter: A Machine-Learning Model for the Prediction of Frequent Hitters. <em>ChemMedChem<\/em> <strong>2018<\/strong>, <strong>13<\/strong> (6), 564-571. DOI: <a href=\"https:\/\/doi.org\/10.1002\/cmdc.201700673\">10.1002\/cmdc.201700673<\/a>.<\/li>\r\n<li>Molecular docking as a tool to virtually develop drugs. <em>Chemicke Listy<\/em> <strong>2017<\/strong>, <strong>111<\/strong>, 754-759.<\/li>\r\n<li>\u0160\u00edcho, M.; Svozil, D. MOLEKULOV\u00c9 DOKOV\u00c1N\u00cd JAKO N\u00c1STROJ PRO VIRTU\u00c1LN\u00cd N\u00c1VRH L\u00c9\u010cIV. <em>Chemick\u00e9 listy<\/em> <strong>2017<\/strong>, <strong>111<\/strong> (11), 754-759.<\/li>\r\n<li>\u0160\u00edcho, M.; Kops, C. D. B.; Stork, C.; Svozil, D.; Kirchmair, J. FAME 2: Simple and Effective Machine Learning Model of Cytochrome P450 Regioselectivity. <em>Journal of Chemical Information and Modeling<\/em> <strong>2017<\/strong>, <strong>57<\/strong> (8), 1832-1846. DOI: <a href=\"https:\/\/doi.org\/10.1021\/acs.jcim.7b00250\">10.1021\/acs.jcim.7b00250<\/a>.<\/li>\r\n<li>\u0160\u00edcho, M.; Svozil, D.; Hoksza, D. Activity-driven exploration of chemical space with morphing. In <em>Proceedings - 2015 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2015<\/em>; 2015; pp 1024-1031. DOI: <a 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